I've come across this many times today. I couldn't complete the following merges because Geni kept giving me a "Technical Difficulties" error when I'd click "merge".
http://www.geni.com/people/Khentkawes/6000000014630262659
http://www.geni.com/people/Khentkaus-I/6000000004869097070
http://www.geni.com/people/Menkaure/6000000014630555355
http://www.geni.com/people/Menkaure/6000000004869097034
There were at least two other sets as well. I tested deleting all my cookies and logging back in and I tested removing some relationships so there were no red highlighted relationship conflicts.